Class: GeneConstraintLZ

LocusZoom_Adapters~GeneConstraintLZ()

Retrieve Gene Constraint Data, as fetched from the gnomAD server (or compatible graphQL api endpoint)

This is intended to be the second request in a chain, with special logic that connects it to Genes data already fetched. It assumes that the genes data is returned from the UM API, and thus the logic involves matching on specific assumptions about gene_name format.

Constructor

new GeneConstraintLZ()

Parameters:
Name Type Attributes Description
config.url string

The base URL for the remote data
config.build <optional>

The genome build to use May be overridden by a global parameter plot.state.genome_build so that all datasets can be fetched for the appropriate build in a consistent way.
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Methods

_normalizeResponse()

The gnomAD API has a very complex internal data format. Bypass any record parsing or transform steps.

Source: